Issues

• splitFasta reads every file as gzip after the first .gz file

  nextflow-io/nextflow#7878 · Filter by author erikrikarddaniel opened on Oct 21, 2026

• nf-k8s: Suggestion - treat a 409 AlreadyExists during job/pod creation as successful

  nextflow-io/nextflow#7864 · Filter by author dvmcconnell opened on Oct 19, 2026

• Typed functions: calling with an Integer (or decimal literal) for a Float parameter fails with argument type mismatch

  nextflow-io/nextflow#7861 · Filter by author bentsherman opened on Oct 19, 2026

• Job array children all write the array wrapper's control files into the shared array work dir

  nextflow-io/nextflow#7858 · Filter by author robsyme opened on Oct 19, 2026
  1

• Type checker: entry.key / entry.value rejected on Map.Entry

  bugtriage/investigate
  nextflow-io/nextflow#7855 · Filter by author bentsherman opened on Oct 19, 2026

• Type checker: null element in a list literal reported as an inconsistent element type

  bugtriage/investigate
  nextflow-io/nextflow#7854 · Filter by author bentsherman opened on Oct 19, 2026

• Workflow emit of a def local variable fails with "Missing workflow output parameter"

  bugtriage/investigate
  nextflow-io/nextflow#7844 · Filter by author bentsherman opened on Oct 18, 2026

• Type checker: == rejected between a record type and a compatible anonymous record

  bugtriage/investigate
  nextflow-io/nextflow#7841 · Filter by author bentsherman opened on Oct 17, 2026

• Google batch "Read timed out" error when collecting output files, causes successful jobs to incorrectly count as a failure.

  nextflow-io/nextflow#7824 · Filter by author KurtGaastra opened on Oct 15, 2026

• [documentation] How to "module run" on multiple sample files ?

  docslang/modules
  nextflow-io/nextflow#7817 · Filter by author tetedange13 opened on Oct 14, 2026
  2

• nf-google: relax minimal version

  executor/google-batch
  nextflow-io/nextflow#7810 · Filter by author matthdsm opened on Oct 13, 2026
  4

• Strict syntax: nested >> in workflow output path {} closure is silently not published

  triage/investigate
  nextflow-io/nextflow#7806 · Filter by author cheng-kevin opened on Oct 12, 2026
  1

• HTTP file system has no connect/read timeout: a stalled download hangs the run

  nextflow-io/nextflow#7800 · Filter by author pditommaso opened on Oct 12, 2026

• Nextflow clean -but does not consider tasks that re-ran properly, breaking caching behaviour

  nextflow-io/nextflow#7792 · Filter by author OlivierBakker opened on Oct 10, 2026

• On abort, onFlowComplete and workflow.onComplete run before onError, and a strict-syntax onError: handler fails to run

  nextflow-io/nextflow#7784 · Filter by author stefanoboriero opened on Oct 9, 2026

• nextflow lint - add CLI flag to warn/fail on use of .view and .dump operators

  nextflow-io/nextflow#7765 · Filter by author prototaxites opened on Oct 6, 2026
  4

• Officially allow merging of plugin blocks in configuration

  lang/configplugins
  nextflow-io/nextflow#7724 · Filter by author nvnieuwk opened on Sep 30, 2026
  2

• Publishing a non-work-directory file with >> in a dynamic path closure throws NPE in PublishOp.getTaskDir

  triage/investigate
  nextflow-io/nextflow#7667 · Filter by author pinin4fjords opened on Sep 23, 2026

• Consistent hangs on "Waiting for file transfers to complete (1 files)" on CephFS/K8S

  executor/k8s
  nextflow-io/nextflow#7666 · Filter by author BioWilko opened on Sep 23, 2026
  1

• TaskHasher folds the evaluated task.ext.* value, putting task.cpus back in the task hash

  nextflow-io/nextflow#7663 · Filter by author jorgee opened on Sep 22, 2026
  2

• Wave container-config env puts operational Fusion settings in the task hash

  software/wavestorage/fusion
  nextflow-io/nextflow#7662 · Filter by author jorgee opened on Sep 22, 2026

• nf-tower: interactive auth prompts hang or fail when stdin is not a terminal

  nextflow-io/nextflow#7642 · Filter by author pditommaso opened on Sep 18, 2026

• nextflow 26.04.x+ incompatible with LSF 10.1.0, Stopping a head job fails to stop compute jobs.

  executor/lsftriage/investigate
  nextflow-io/nextflow#7640 · Filter by author Rabbi-Genomics opened on Sep 18, 2026
  1

• Globstar output patterns may result in invalid move operations when scratch = true and stageOutMode = move

  triage/investigate
  nextflow-io/nextflow#7637 · Filter by author dodslaser opened on Sep 18, 2026

• Google Batch: Fusion scratch mount omitted for machines with built-in Local SSDs (-lssd)

  executor/google-batchstorage/fusion
  nextflow-io/nextflow#7627 · Filter by author adamhowardprice opened on Sep 15, 2026
  1